Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3137Hypothetical protein. (179 aa)    
Predicted Functional Partners:
ACPL_7923
Chemotaxis protein motB; Flagellar motor protein.
 
 0.882
flgE
Flagellar hook protein FlgE.
   
 
 0.859
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 
 0.823
ACPL_8364
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 
 0.823
flgC
Flagellar basal body rod protein.
   
 
 0.819
fliE
Flagellar hook-basal body complex protein FliE.
  
 
 0.801
ACPL_4105
Hypothetical protein; Multidrug resistance efflux pump.
     
 0.786
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.706
ACPL_1195
Hypothetical protein.
   
 0.705
ACPL_132
Hypothetical protein.
   
 0.705
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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