STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3142Lactic acid dehydrogenase; FAD/FMN-containing dehydrogenases. (998 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase domain 2.
     
 0.844
ypeA
Acetyltransferases.
       0.773
fixA
Protein fixA; Electron transfer flavoprotein, beta subunit.
  
 
 0.739
ACPL_2316
Iron-sulfur cluster binding protein; Uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.738
ACPL_4163
Iron-sulfur cluster binding protein; Uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.738
ACPL_7394
Protein fixB; Electron transfer flavoprotein, alpha subunit.
  
 
 0.735
lctP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.731
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.699
ACPL_2317
Uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.681
ACPL_4162
Uncharacterized conserved protein containing a ferredoxin-like domain.
  
 
 0.681
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.