STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3156propionyl-CoA carboxylase beta chain; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta). (524 aa)    
Predicted Functional Partners:
ACPL_3157
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 0.944
ACPL_3155
Hypothetical protein.
 
  
 0.930
ACPL_3158
Acyl-CoA dehydrogenases.
 
  
 0.890
yngH
Biotin carboxylase.
 
 0.853
accA
Biotin carboxylase.
 
 0.850
birA
Biotin-(acetyl-CoA carboxylase) ligase.
 
 
 0.798
mccA
propionyl-CoA carboxylase alpha chain; Biotin carboxylase.
 0.779
mvaB
hydroxymethylglutaryl-CoA lyase; Isopropylmalate/homocitrate/citramalate synthases.
 
 
 0.744
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.740
lamA
Biotin carboxylase.
 
 0.675
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.