Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ybhCPutative pectinesterase; Pectin methylesterase. (396 aa)    
Predicted Functional Partners:
ACPL_5020
Pectate lyase.
 
  
 0.943
pel
Pectate lyase/Amb allergen; Pectate lyase.
 
  
 0.941
ACPL_2701
Pectate lyase.
 
  
 0.935
ACPL_5019
Pectinesterase; Pectin methylesterase.
  
  
 
0.927
ACPL_5719
Pectinesterase; Pectin methylesterase.
  
  
 
0.927
glcI
Glucan endo-1,3-beta-glucosidase; Uncharacterized protein conserved in bacteria.
  
     0.616
ACPL_2155
6-phospho-beta-glucosidase; Alpha-galactosidases/6-phospho-beta- glucosidases, family 4 of glycosyl hydrolases.
    
 0.524
pkn5
Serine/threonine-protein kinase MARK2; Serine/threonine protein kinase.
       0.497
ACPL_3660
Glycoside hydrolase family protein; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.490
ACPL_3161
Hypothetical protein.
       0.487
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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