STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxBFerredoxin fas2. (67 aa)    
Predicted Functional Partners:
ACPL_3162
Cytochrome P450.
 
  
 0.910
fprC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
   
 0.879
ACPL_3165
Hypothetical protein.
 
     0.773
ACPL_4699
Cytochrome P450.
 
  
 0.638
porA
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
 
   
 0.444
ACPL_3161
Hypothetical protein.
  
    0.438
ACPL_4437
Predicted transcriptional regulators.
  
     0.424
pkn5
Serine/threonine-protein kinase MARK2; Serine/threonine protein kinase.
       0.414
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.