STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3168Hypothetical protein. (276 aa)    
Predicted Functional Partners:
ACPL_3167
Uncharacterized protein conserved in bacteria.
       0.762
ACPL_2056
Predicted membrane protein.
  
     0.567
ACPL_3166
Hypothetical protein; Methylase involved in ubiquinone/menaquinone biosynthesis.
       0.542
glgB
1,4-alpha-glucan branching enzyme.
   
 0.493
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.493
treZ
Maltooligosyltrehalose trehalohydrolase; 1,4-alpha-glucan branching enzyme.
   
 0.493
ACPL_7082
Isoamylase N-terminal domain-containing protein; 1,4-alpha-glucan branching enzyme.
   
 0.493
ACPL_4453
Hypothetical protein; Hydrolases of the alpha/beta superfamily.
  
    0.419
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.