STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3177Ricin; Endoglucanase. (724 aa)    
Predicted Functional Partners:
ACPL_4964
Coagulation factor 5/8 type domain protein; Beta-glucanase/Beta-glucan synthetase.
   
 0.742
ACPL_4483
Coagulation factor 5/8 type domain protein; Phage-related protein.
 
   
 0.709
chiA-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.678
ACPL_630
Pre-neck appendage protein.
 
     0.653
ACPL_6837
Coagulation factor 5/8 type domain protein; Rhs family protein.
 
     0.633
ACPL_6836
APHP domain protein.
 
     0.627
chiD
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.616
chiC
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
 
 0.611
ACPL_4966
Hypothetical protein; FOG: PKD repeat.
   
 0.586
ACPL_2827
Coagulation factor 5/8 type domain protein; Beta-glucanase/Beta-glucan synthetase.
 
     0.581
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.