STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3191Hypothetical protein; Putative translation factor (SUA5). (209 aa)    
Predicted Functional Partners:
ACPL_819
Ycf40-like uncharacterized protein.
  
 
 0.807
ACPL_3192
Nitroreductase.
       0.791
ACPL_3193
Nitroreductase.
       0.791
thiG
Thiamine biosynthesis ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.785
moaE
Molybdenum cofactor biosynthesis protein E; Molybdopterin converting factor, large subunit.
  
 0.773
ACPL_1778
Hypothetical protein; ATP-dependent Lon protease, bacterial type.
    
 0.719
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
  
 0.621
ACPL_1641
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 0.618
ACPL_7393
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 0.618
ACPL_3190
ycaO-like uncharacterized protein.
     
 0.616
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.