STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3197Uncharacterized protein conserved in bacteria. (416 aa)    
Predicted Functional Partners:
ACPL_3198
yfeW-like uncharacterized protein; Beta-lactamase class C and other penicillin binding proteins.
  
 0.990
murQ
N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
    0.878
ACPL_3196
Transcriptional regulators.
 
  
 0.747
ACPL_6569
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
 
  
 0.715
nagA
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
 
  
 0.709
ACPL_7409
beta-N-acetylhexosaminidase; Beta-glucosidase-related glycosidases.
 
  
 0.649
nagK
Predicted N-acetylglucosamine kinase.
 
    0.635
ACPL_3199
Maltose-binding periplasmic proteins/domains.
 
     0.543
ACPL_2156
ATPase BadF/BadG/BcrA/BcrD type; Predicted N-acetylglucosamine kinase.
 
    0.536
ACPL_3200
ABC-type sugar transport systems, permease components.
       0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.