| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACPL_1659 | ACPL_321 | ACPL_1659 | ACPL_321 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | 0.756 |
| ACPL_1659 | ACPL_5784 | ACPL_1659 | ACPL_5784 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | UvrABC system protein C; Nuclease subunit of the excinuclease complex. | 0.714 |
| ACPL_1659 | dnaQ | ACPL_1659 | ACPL_6692 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | DNA polymerase III, alpha subunit (gram-positive type). | 0.983 |
| ACPL_1659 | drrC | ACPL_1659 | ACPL_5069 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | UvrABC system protein A; Excinuclease ATPase subunit. | 0.904 |
| ACPL_1659 | ruvA | ACPL_1659 | ACPL_6534 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.909 |
| ACPL_1659 | ruvB | ACPL_1659 | ACPL_6533 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.918 |
| ACPL_1659 | ruvC | ACPL_1659 | ACPL_6535 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.918 |
| ACPL_1659 | uvrA | ACPL_1659 | ACPL_1848 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.924 |
| ACPL_1659 | uvrB | ACPL_1659 | ACPL_1834 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.987 |
| ACPL_1659 | uvrC | ACPL_1659 | ACPL_1850 | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.842 |
| ACPL_321 | ACPL_1659 | ACPL_321 | ACPL_1659 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | DNA polymerase III subunit epsilon; Nuclease subunit of the excinuclease complex. | 0.756 |
| ACPL_321 | ACPL_5784 | ACPL_321 | ACPL_5784 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | UvrABC system protein C; Nuclease subunit of the excinuclease complex. | 0.460 |
| ACPL_321 | dnaQ | ACPL_321 | ACPL_6692 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | DNA polymerase III, alpha subunit (gram-positive type). | 0.546 |
| ACPL_321 | drrC | ACPL_321 | ACPL_5069 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | UvrABC system protein A; Excinuclease ATPase subunit. | 0.460 |
| ACPL_321 | ruvA | ACPL_321 | ACPL_6534 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. | 0.581 |
| ACPL_321 | ruvB | ACPL_321 | ACPL_6533 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.581 |
| ACPL_321 | ruvC | ACPL_321 | ACPL_6535 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. | 0.581 |
| ACPL_321 | uvrA | ACPL_321 | ACPL_1848 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.460 |
| ACPL_321 | uvrB | ACPL_321 | ACPL_1834 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.597 |
| ACPL_321 | uvrC | ACPL_321 | ACPL_1850 | Transposase for insertion sequence element ISRM3; Required for the transposition of the insertion element. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.460 |
