STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3217Hypothetical protein. (307 aa)    
Predicted Functional Partners:
ACPL_1137
Hypothetical protein.
  
     0.773
ACPL_646
Hypothetical protein.
  
     0.758
ACPL_4336
Hypothetical protein; Predicted GTPases (dynamin-related).
 
     0.706
ACPL_2589
Heat shock cognate 71 kDa protein; Molecular chaperone.
  
     0.705
ACPL_644
Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.
  
     0.705
ACPL_4337
Hypothetical protein; Translation elongation factors (GTPases).
  
     0.639
ACPL_1077
Predicted transcriptional regulators.
  
     0.501
ACPL_1602
Hypothetical protein.
  
     0.486
ACPL_1599
Secretion protein snm4.
  
    0.463
ACPL_3214
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
       0.457
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.