STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3235Hypothetical protein. (629 aa)    
Predicted Functional Partners:
ACPL_3234
Hypothetical protein.
       0.785
ACPL_7613
Ectoine hydroxylase.
  
     0.678
ACPL_2007
Hypothetical protein.
  
     0.618
ACPL_8044
Regulator of G-protein signaling 12.
  
     0.613
ACPL_2029
Uncharacterized protein conserved in bacteria.
  
     0.602
ACPL_6556
Large exoproteins involved in heme utilization or adhesion.
  
     0.557
ACPL_5342
Eukaryotic translation initiation factor 3 subunit A.
  
     0.545
ACPL_2231
Activated CDC42 kinase 1; FOG: PKD repeat.
  
     0.544
ACPL_1222
Hypothetical protein.
  
     0.529
ACPL_3629
Hypothetical protein; FOG: WD40 repeat.
  
     0.522
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.