STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3239Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (400 aa)    
Predicted Functional Partners:
ACPL_5578
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); FOG: GGDEF domain.
 
 
 0.827
ACPL_2604
Cellulose synthesis regulatory protein; Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
  
 0.816
ACPL_5348
Putative membrane protein in llm 5'region; Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
  
 0.800
ACPL_3614
Putative signaling protein; FOG: GGDEF domain.
 
 0.793
ACPL_6460
Chemotaxis response regulator protein-glutamate methylesterase; Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
  
 
 0.788
ACPL_7022
y4lL-like uncharacterized protein; FOG: GGDEF domain.
 
 0.783
ACPL_2826
Putative signaling protein; FOG: GGDEF domain.
  
    0.781
ACPL_3854
y4lL-like uncharacterized protein; FOG: GGDEF domain.
 
 
 0.780
ACPL_4152
yegE-like uncharacterized protein; Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.780
ACPL_3512
Putative signaling protein; FOG: GGDEF domain.
  
    0.775
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.