STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3240Hypothetical protein; Hydrolases of the alpha/beta superfamily. (259 aa)    
Predicted Functional Partners:
ACPL_3241
Hypothetical protein.
       0.678
ACPL_1182
S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.
  
     0.647
ACPL_770
Hypothetical protein.
  
     0.601
ACPL_6791
Endonuclease/exonuclease/phosphatase; Exonuclease III.
  
     0.591
ACPL_7056
Pecanex-like protein 1; Transcription elongation factor.
  
     0.581
ACPL_3239
Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.563
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
  
     0.537
ACPL_1286
Hypothetical protein.
  
     0.535
ACPL_4402
Hypothetical protein.
  
     0.519
ACPL_8314
Hypothetical protein.
  
     0.513
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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