STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3320Uncharacterized protein conserved in bacteria. (743 aa)    
Predicted Functional Partners:
ACPL_3321
Tetratricopeptide repeat protein 28; FOG: TPR repeat.
     0.890
ACPL_3322
ATPase; MoxR-like ATPases.
 
   
 0.806
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.743
ACPL_4656
Signal transduction protein; Predicted NTPase (NACHT family).
 
 
 
 0.702
ACPL_6916
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.676
ACPL_6129
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.648
ACPL_2334
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 
  0.637
ACPL_3091
Serine/threonine protein kinase; Predicted ATPase.
 
  
 0.635
ACPL_8364
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 0.631
dnaK-3
Molecular chaperone.
  
 0.609
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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