ACPL_3322 protein (Actinoplanes sp. SE50110)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ACPL_3322

ATPase; MoxR-like ATPases. (270 aa)

Predicted Functional Partners:

ACPL_3320

0.804

ACPL_3321

0.777

ACPL_7021

0.545

ACPL_3318

0.526

ACPL_3319

0.526

ACPL_2881

0.468

ACPL_3323

0.453

ACPL_183

0.432

ACPL_3520

0.427

ACPL_1133

0.415

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ACPL_1133	ACPL_3322	Nephrocystin-3; FOG: TPR repeat.	ATPase; MoxR-like ATPases.	0.415
ACPL_183	ACPL_3322	Acyl-CoA dehydrogenases.	ATPase; MoxR-like ATPases.	0.432
ACPL_2881	ACPL_3322	Collagen alpha-5(VI) chain; Translation initiation factor 2 (IF-2; GTPase).	ATPase; MoxR-like ATPases.	0.468
ACPL_3318	ACPL_3319	Uncharacterized protein conserved in bacteria.	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	0.773
ACPL_3318	ACPL_3320	Uncharacterized protein conserved in bacteria.	Uncharacterized protein conserved in bacteria.	0.526
ACPL_3318	ACPL_3321	Uncharacterized protein conserved in bacteria.	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	0.526
ACPL_3318	ACPL_3322	Uncharacterized protein conserved in bacteria.	ATPase; MoxR-like ATPases.	0.526
ACPL_3319	ACPL_3318	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	Uncharacterized protein conserved in bacteria.	0.773
ACPL_3319	ACPL_3320	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	Uncharacterized protein conserved in bacteria.	0.526
ACPL_3319	ACPL_3321	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	0.526
ACPL_3319	ACPL_3322	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	ATPase; MoxR-like ATPases.	0.526
ACPL_3320	ACPL_3318	Uncharacterized protein conserved in bacteria.	Uncharacterized protein conserved in bacteria.	0.526
ACPL_3320	ACPL_3319	Uncharacterized protein conserved in bacteria.	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	0.526
ACPL_3320	ACPL_3321	Uncharacterized protein conserved in bacteria.	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	0.948
ACPL_3320	ACPL_3322	Uncharacterized protein conserved in bacteria.	ATPase; MoxR-like ATPases.	0.804
ACPL_3320	ACPL_3323	Uncharacterized protein conserved in bacteria.	Hypothetical protein.	0.453
ACPL_3321	ACPL_3318	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	Uncharacterized protein conserved in bacteria.	0.526
ACPL_3321	ACPL_3319	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	Putative peptidoglycan O-acetyltransferase yrhL; Predicted acyltransferases.	0.526
ACPL_3321	ACPL_3320	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	Uncharacterized protein conserved in bacteria.	0.948
ACPL_3321	ACPL_3322	Tetratricopeptide repeat protein 28; FOG: TPR repeat.	ATPase; MoxR-like ATPases.	0.777