Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3369Hypothetical protein; FOG: PKD repeat. (1192 aa)    
Predicted Functional Partners:
ACPL_5518
alpha-N-arabinofuranosidase; Alpha-L-arabinofuranosidase.
  
 0.800
ACPL_5519
alpha-N-arabinofuranosidase; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.794
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.791
glcI
Glucan endo-1,3-beta-glucosidase; Uncharacterized protein conserved in bacteria.
 
   
 0.655
ACPL_3007
Hypothetical protein.
  
     0.590
ACPL_3011
Hypothetical protein; Poly(3-hydroxybutyrate) depolymerase.
  
     0.578
ACPL_3660
Glycoside hydrolase family protein; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.560
ACPL_2106
Nigrin b; O-Glycosyl hydrolase.
  
     0.559
pelX
Pectate lyase/Amb allergen; Subtilisin-like serine proteases.
 
  
 0.538
celD-2
Endoglucanase E-4; Cellobiohydrolase A (1,4-beta-cellobiosidase A).
  
  
 0.531
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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