STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3370Thrombin-like enzyme gussurobin; Secreted trypsin-like serine protease. (248 aa)    
Predicted Functional Partners:
ACPL_1393
Collagen alpha-5(VI) chain; PPE-repeat proteins.
  
     0.602
ank2
Ankyrin-2; FOG: Ankyrin repeat.
  
 
 0.599
sprU
Anionic trypsin-2; Secreted trypsin-like serine protease.
  
     0.574
ACPL_1580
Hypothetical protein; ATPases involved in chromosome partitioning.
  
 
   0.556
ACPL_6494
Collagen alpha-2(I) chain; Superfamily II DNA and RNA helicases.
  
 
   0.553
g7c
Protein G7c.
  
     0.537
ACPL_3161
Hypothetical protein.
    
 0.527
ACPL_6712
Serine/threonine protein kinase.
    
 0.527
bag-2
IgA FC receptor.
  
     0.512
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
   
 0.510
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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