STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapM-2Acid phosphatase. (276 aa)    
Predicted Functional Partners:
sapM
Acid phosphatase.
  
  
 
0.905
plcN
Phospholipase C.
    
  0.902
plcN-2
Phospholipase C.
    
  0.902
ACPL_3381
Hypothetical protein; Uncharacterized membrane-anchored protein conserved in bacteria.
 
     0.586
ACPL_3312
Hypothetical protein.
  
     0.579
ACPL_2615
Putative inorganic polyphosphate/ATP-NAD kinase; Predicted sugar kinase.
  
  
  0.557
ACPL_3382
ABC-type uncharacterized transport system, permease component.
       0.547
ACPL_131
Hypothetical protein.
  
     0.546
bga7-2
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
     0.545
ACPL_1111
Regulatory protein; FOG: TPR repeat.
  
     0.514
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.