STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3385Hypothetical protein; Predicted transcriptional regulator. (107 aa)    
Predicted Functional Partners:
ACPL_3384
HtpX-like probable protease protein; Zn-dependent protease with chaperone function.
 
    0.944
ACPL_4431
HtpX-like Probable protease protein; Zn-dependent protease with chaperone function.
 
    0.655
ACPL_3030
Hypothetical protein; Zn-dependent protease with chaperone function.
 
    0.573
ACPL_3386
Hypothetical protein.
       0.545
ACPL_3713
Cation-transporting ATPase pacS.
  
  
 0.533
copZ
Cation-transporting ATPase pacS.
  
  
 0.533
ACPL_805
Uncharacterized protein.
  
     0.468
ACPL_3886
Hypothetical protein.
  
     0.435
ACPL_3387
Hypothetical protein.
       0.427
ACPL_4009
Putative lipid kinase yegS-like protein; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
  
     0.405
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.