STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3394Hypothetical protein; Predicted acyl esterases. (520 aa)    
Predicted Functional Partners:
cckA
Osmosensitive K+ channel histidine kinase.
       0.563
ehuB
Membrane-bound lytic murein transglycosylase F; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.554
bar
Phosphinothricin acetyltransferase; Sortase and related acyltransferases.
       0.525
ACPL_1006
Asparagine synthase (glutamine-hydrolyzing).
 
     0.482
ACPL_5105
Uncharacterized protein conserved in bacteria.
  
     0.452
ACPL_5847
HtpX-like probable protease; Zn-dependent protease with chaperone function.
  
     0.420
ACPL_4403
Hypothetical protein.
  
     0.404
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.