STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3415Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain. (727 aa)    
Predicted Functional Partners:
ACPL_3288
Phytochrome-like protein cph2; FOG: EAL domain.
 
 
0.545
ACPL_1150
y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.544
ACPL_315
Phytochrome-like protein cph2; FOG: EAL domain.
 
 
0.544
ACPL_3661
Phytochrome-like protein cph2; FOG: EAL domain.
 
 
0.544
ACPL_7022
y4lL-like uncharacterized protein; FOG: GGDEF domain.
 
 
0.544
ACPL_2719
Phytochrome-like protein cph2; FOG: EAL domain.
 
 
0.540
ACPL_3519
Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.531
ACPL_3646
Protein adrA; FOG: GGDEF domain.
 
 
0.531
ACPL_5096
Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.521
ACPL_3461
Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
 
0.508
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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