Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_348Teneurin-3; Rhs family protein. (3658 aa)    
Predicted Functional Partners:
ACPL_3372
Teneurin-1; Rhs family protein.
  
  
 
0.917
ACPL_6765
Hypothetical protein; Predicted NTPase (NACHT family).
  
     0.589
ACPL_4403
Hypothetical protein.
  
     0.584
ACPL_5039
Immunoglobulin G-binding protein A.
 
  
 0.579
ACPL_349
Hypothetical protein.
  
     0.577
ACPL_430
Leucine rich repeat variant; Predicted NTPase (NACHT family).
 
     0.526
ACPL_270
ycgQ-like uncharacterized protein; Predicted membrane protein.
  
     0.508
ACPL_2724
Predicted membrane protein.
  
     0.496
chiA-3
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 
 0.471
ACPL_269
ycgR-like uncharacterized protein; Predicted permeases.
  
     0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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