STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3483Tetratricopeptide repeat protein 28; FOG: TPR repeat. (965 aa)    
Predicted Functional Partners:
ogt-2
UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; FOG: TPR repeat.
 
 
 0.769
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.762
ACPL_6128
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 
  0.677
ACPL_6129
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.676
gltB
Glutamate synthase domain 2.
     
 0.668
ACPL_5648
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 
  0.664
htpG
Chaperone protein htpG; Molecular chaperone, HSP90 family.
 
 0.654
dnaK-3
Molecular chaperone.
  
 0.641
ACPL_8364
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 0.631
ACPL_4783
Nephrocystin-3; FOG: TPR repeat.
 
 
 0.629
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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