STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3484Hypothetical protein. (332 aa)    
Predicted Functional Partners:
ACPL_3212
Hypothetical protein; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
  
 
  0.734
ACPL_4741
Hypothetical protein.
  
    0.698
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
 
 
 0.631
ACPL_8274
Hypothetical protein.
  
     0.630
ACPL_3483
Tetratricopeptide repeat protein 28; FOG: TPR repeat.
  
   0.629
ACPL_3325
Tolloid-like protein 1.
 
     0.616
ACPL_3814
Platelet-activating factor acetylhydrolase 2, cytoplasmic; Predicted dienelactone hydrolase.
  
     0.593
ACPL_3002
Hypothetical protein.
  
    0.577
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
  
    0.574
pks3C
Polyketide synthase modules and related proteins.
 
 
 0.567
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.