Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3495Hypothetical protein. (82 aa)    
Predicted Functional Partners:
ACPL_3497
Hypothetical protein.
 
     0.956
ACPL_3498
Uncharacterized protein; Type IV secretory pathway, VirB4 components.
 
   
 0.955
ACPL_3499
Hypothetical protein; Predicted ATPase.
 
   
 0.953
ACPL_3496
Hypothetical protein.
 
     0.948
ACPL_3494
Hypothetical protein.
 
     0.899
ACPL_3500
3-oxoacyl-[acyl-carrier-protein] synthase 3.
 
     0.892
ACPL_3510
Hypothetical protein; Response regulator containing CheY-like receiver and SARP domains.
  
     0.728
ACPL_3508
Otogelin; Uncharacterized protein containing LysM domain.
  
     0.694
lieB
Leupeptin-inactivating enzyme 2; Zinc metalloprotease (elastase).
  
    0.528
ACPL_5889
Hypothetical protein.
  
     0.519
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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