Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_3502Uncharacterized protein; Predicted nucleoside-diphosphate sugar epimerase. (327 aa)    
Predicted Functional Partners:
ACPL_7276
Signal peptidase I; Belongs to the peptidase S26 family.
   
    0.605
ACPL_3501
Transposase, IS4 family protein; Transposase and inactivated derivatives.
       0.576
ACPL_3500
3-oxoacyl-[acyl-carrier-protein] synthase 3.
       0.468
ACPL_5333
WGR domain protein.
 
    0.448
ACPL_3503
Hypothetical protein.
       0.440
ACPL_3504
Hypothetical protein.
       0.440
ACPL_5868
Hypothetical protein.
 
    0.435
ACPL_6281
Hypothetical protein.
 
    0.422
ACPL_1396
Hypothetical protein.
 
    0.418
ideR
Iron-dependent repressor ideR; Mn-dependent transcriptional regulator.
   
    0.404
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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