STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
muc4Mucin-4; PPE-repeat proteins. (2809 aa)    
Predicted Functional Partners:
dprA
Protein smf; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
       0.518
ACPL_3514
Hypothetical protein.
       0.480
ACPL_2896
Hypothetical protein.
  
   
 0.450
ACPL_5001
Endoglucanase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.450
ACPL_6866
G-protein coupled receptor 98; RTX toxins and related Ca2+-binding proteins.
  
     0.446
ACPL_7314
Histone-lysine N-methyltransferase MLL3.
 
     0.434
ACPL_5237
Signal peptidase I.
  
     0.424
ACPL_3043
Transmembrane protein (fibronectin III domain and GP5 C-terminal repeat).
  
     0.415
ACPL_6902
Endoglucanase; Endo-beta-mannanase.
  
     0.406
eglA
Endoglucanase; Endo-beta-mannanase.
  
     0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.