STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3525Hypothetical protein. (141 aa)    
Predicted Functional Partners:
ACPL_4898
Hypothetical protein.
  
     0.572
pclO
Predicted membrane protein.
  
     0.543
ACPL_3526
Hypothetical protein.
       0.540
ACPL_3527
Hypothetical protein.
       0.540
ACPL_3524
Signal transduction histidine kinase.
       0.493
ACPL_826
Ribonuclease; Guanyl-specific ribonuclease Sa.
  
     0.476
ACPL_7669
HTH-type transcriptional regulator malT; Predicted ATPase.
  
     0.471
ACPL_3480
Guanine-specific ribonuclease N1 and T1.
  
     0.437
ACPL_4895
Tetratricopeptide repeat protein 28; Uncharacterized protein conserved in bacteria.
  
     0.434
prsR-3
Anti-sigma F factor; Signal transduction histidine kinase.
  
     0.424
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.