Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACPL_3529 | ACPL_3530 | ACPL_3529 | ACPL_3530 | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.576 |
ACPL_3529 | ACPL_3531 | ACPL_3529 | ACPL_3531 | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | Hypothetical protein. | 0.576 |
ACPL_3529 | ACPL_3532 | ACPL_3529 | ACPL_3532 | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | 0.460 |
ACPL_3530 | ACPL_3529 | ACPL_3530 | ACPL_3529 | Hypothetical protein. | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | 0.576 |
ACPL_3530 | ACPL_3531 | ACPL_3530 | ACPL_3531 | Hypothetical protein. | Hypothetical protein. | 0.940 |
ACPL_3530 | ACPL_3532 | ACPL_3530 | ACPL_3532 | Hypothetical protein. | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | 0.613 |
ACPL_3531 | ACPL_3529 | ACPL_3531 | ACPL_3529 | Hypothetical protein. | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | 0.576 |
ACPL_3531 | ACPL_3530 | ACPL_3531 | ACPL_3530 | Hypothetical protein. | Hypothetical protein. | 0.940 |
ACPL_3531 | ACPL_3532 | ACPL_3531 | ACPL_3532 | Hypothetical protein. | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | 0.613 |
ACPL_3531 | ACPL_5567 | ACPL_3531 | ACPL_5567 | Hypothetical protein. | ADP-ribose 1''-phosphate phosphatase; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.515 |
ACPL_3531 | ACPL_7943 | ACPL_3531 | ACPL_7943 | Hypothetical protein. | Uncharacterized protein; Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1. | 0.485 |
ACPL_3531 | folP | ACPL_3531 | ACPL_3037 | Hypothetical protein. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.443 |
ACPL_3531 | folP-2 | ACPL_3531 | ACPL_8079 | Hypothetical protein. | Dihydropteroate synthase and related enzymes. | 0.437 |
ACPL_3531 | kptA | ACPL_3531 | ACPL_245 | Hypothetical protein. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.480 |
ACPL_3531 | rbpA-2 | ACPL_3531 | ACPL_2796 | Hypothetical protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.439 |
ACPL_3531 | rpoB | ACPL_3531 | ACPL_773 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.515 |
ACPL_3532 | ACPL_3529 | ACPL_3532 | ACPL_3529 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Methyl-accepting chemotaxis sensory transducer; Serine phosphatase RsbU, regulator of sigma subunit. | 0.460 |
ACPL_3532 | ACPL_3530 | ACPL_3532 | ACPL_3530 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.613 |
ACPL_3532 | ACPL_3531 | ACPL_3532 | ACPL_3531 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.613 |
ACPL_3532 | kptA | ACPL_3532 | ACPL_245 | Swarming motility protein ybiA; Uncharacterized protein conserved in bacteria. | Putative RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase. | 0.533 |
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