STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3541Hypothetical protein. (1476 aa)    
Predicted Functional Partners:
mutL
Methylaspartate mutase.
   
 
 0.860
ACPL_5563
Sphingomyelin phosphodiesterase 2.
  
    0.716
ACPL_3540
Hypothetical protein.
       0.701
ACPL_3542
Hypothetical protein.
       0.623
ACPL_3543
Hypothetical protein.
       0.623
ACPL_639
Hypothetical protein.
  
     0.622
ACPL_1206
Glycoside hydrolase family 9.
  
     0.583
ACPL_1260
GTP pyrophosphokinase; Guanosine polyphosphate pyrophosphohydrolases/synthetases.
  
  
 0.570
ACPL_7802
Filamentous hemagglutinin; GTPase-activating protein.
  
     0.554
ACPL_3539
Hypothetical protein.
       0.527
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.