STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3561Polypeptide N-acetylgalactosaminyltransferase 6; Uncharacterized protein conserved in bacteria. (937 aa)    
Predicted Functional Partners:
ACPL_4904
Secreted hydrolase; Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
  
     0.553
ACPL_1036
Glucosylceramidase; O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
     0.516
gba
Glucosylceramidase; O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
 
     0.500
bga7-2
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
     0.458
ACPL_4519
Cellulose-binding family II; Alpha-L-arabinofuranosidase.
 
   
 0.437
ACPL_1157
Endopolygalacturonase.
  
     0.435
ACPL_1479
Putative hydrolase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.403
abnA
Arabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase.
 
   
 0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.