STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3577Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component. (788 aa)    
Predicted Functional Partners:
ACPL_3578
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 
 0.922
ACPL_5255
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 
 0.711
ACPL_5144
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 
 0.706
ACPL_6732
ABC-type sugar transport systems, ATPase components.
 
 
 0.676
ACPL_6766
Spermidine/putrescine import ATP-binding protein potA; ABC-type oligopeptide transport system, ATPase component.
 
 
 0.672
ACPL_2783
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
 
 0.671
ACPL_3579
Oxygen sensor histidine kinase nreB; Signal transduction histidine kinase, glucose-6-phosphate specific.
 
     0.656
ACPL_3020
Outer membrane lipoprotein-sorting protein.
   
 
 0.634
ACPL_3576
ADP-ribosylglycohydrolase.
       0.634
ACPL_3580
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.550
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.