STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3592Carbamoyl-phosphate synthase large chain; Biotin carboxylase. (855 aa)    
Predicted Functional Partners:
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.845
ACPL_3591
Similar to mitochondrial Short-chain specific acyl-CoA dehydrogenase; Acyl-CoA dehydrogenases.
 
   
 0.841
ACPL_3587
Hypothetical protein.
 
     0.836
ACPL_3593
yqjV-like uncharacterized MFS-type transporter; Sugar phosphate permease.
 
     0.833
ACPL_3594
Glycine/D-amino acid oxidases (deaminating).
 
     0.831
ACPL_3590
Similar to mitochondrial Short-chain specific acyl-CoA dehydrogenase; Acyl-CoA dehydrogenases.
 
   
 0.793
ACPL_3589
Radical SAM domain protein; Fe-S oxidoreductase.
 
     0.777
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.760
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
     
 0.760
birA
Biotin-(acetyl-CoA carboxylase) ligase.
  
 0.749
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.