STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lipGEpoxide hydrolase 2; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily). (299 aa)    
Predicted Functional Partners:
tetR-7
Tetracycline repressor protein class H; Transcriptional regulator.
 
     0.733
sucA
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
   
 0.686
ephA
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.605
ACPL_1533
2-oxoisovalerate dehydrogenase E1 component; Transketolase.
   
 0.545
ACPL_3124
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
   
 0.545
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.532
ACPL_2561
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.458
ACPL_3831
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.457
ACPL_721
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.456
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.439
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.