STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tetR-8Tetracycline repressor protein class C; Transcriptional regulator. (230 aa)    
Predicted Functional Partners:
tetR-16
Tetracycline repressor protein class A; From transposon 1721; Transcriptional regulator.
  
     0.600
tetR-6
Tetracycline repressor protein class H; Transcriptional regulator.
  
     0.596
ACPL_2134
Protein related to penicillin acylase.
  
     0.530
ACPL_3609
GCN5-related N-acetyltransferase; Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.505
ACPL_4359
Extracellular matrix-binding protein ebhB; Type V secretory pathway, adhesin AidA.
  
     0.495
ACPL_8017
YD repeat-containing protein; Uncharacterized protein involved in chromosome partitioning.
  
     0.488
modR
Regulatory protein afsR.
  
     0.481
ACPL_6751
YD repeat-containing protein; Predicted membrane protein.
  
     0.465
ACPL_4045
Phenazine biosynthesis protein phzB 2; Ketosteroid isomerase-related protein.
  
     0.464
tetR-13
Tetracycline repressor protein class B from transposon Tn10; Transcriptional regulator.
  
     0.463
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.