STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3649Uncharacterized protein. (131 aa)    
Predicted Functional Partners:
pksA-2
Transcriptional regulator.
       0.562
ACPL_3650
Hypothetical protein.
       0.480
ACPL_4763
FMN reductase; Predicted flavoprotein.
  
   
 0.474
ACPL_1800
Hypothetical protein.
  
     0.464
ACPL_2692
Hypothetical protein.
  
     0.455
ACPL_7184
Laminin subunit beta-1; Phage shock protein A (IM30), suppresses sigma54-dependent transcription.
  
  
 0.414
tetR-3
Tetracycline repressor protein class E; Transcriptional regulator.
  
     0.409
ACPL_557
Phage shock protein C, PspC.
 
    0.407
ACPL_5566
Monooxygenase FAD-binding protein; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
     0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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