STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbWABC transporter ATP-binding protein. (357 aa)    
Predicted Functional Partners:
acbX
ABC transporter permease protein.
 
  
 0.957
acbY
ABC transporter permease protein.
 
  
 0.953
ACPL_3215
ABC-type uncharacterized transport system, permease component.
 
  
 0.819
ACPL_5012
Protein of unknown function DUF990; ABC-type uncharacterized transport system, permease component.
 
  
 0.819
ACPL_1629
ABC-type uncharacterized transport system, permease component.
 
  
 0.816
ACPL_3216
ABC-type uncharacterized transport system, permease component.
 
  
 0.807
ACPL_5013
Predicted membrane protein.
 
  
 0.801
ACPL_1630
ABC-type uncharacterized transport system, permease component.
 
  
 0.800
acbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis; Belongs to the glucose-1-phosphate thymidylyltransferase family.
      
 0.443
acbV
dTDP-4-keto-6-deoxy-glucose 4-aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
      
 0.435
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.