STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbEAcarbose resistent alpha-amylase; Belongs to the glycosyl hydrolase 13 family. (1033 aa)    
Predicted Functional Partners:
acbI
Glycosyltransferase.
  
  
 0.906
acbS
Glycosyltransferase.
  
  
 0.893
ACPL_7082
Isoamylase N-terminal domain-containing protein; 1,4-alpha-glucan branching enzyme.
 
  
 0.838
malP
Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 
 0.820
glgB
1,4-alpha-glucan branching enzyme.
  
  
 0.810
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.810
treZ
Maltooligosyltrehalose trehalohydrolase; 1,4-alpha-glucan branching enzyme.
  
  
 0.810
acbR
1-epi-valienol-1, 7-bisphosphate-1-adenylyltransferase.
  
  
 0.782
treY
(1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; Maltooligosyl trehalose synthase.
  
  
 0.778
acbD
Acarviose transferase (ATase); Belongs to the glycosyl hydrolase 13 family.
 
  
0.740
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.