STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbGABC transporter membrane protein. (281 aa)    
Predicted Functional Partners:
acbF
ABC transporter membrane protein.
 
   0.971
acbH
ABC transporter galactose binding protein.
 
 
 0.967
msiK
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.881
ACPL_3200
ABC-type sugar transport systems, permease components.
 
 
 0.874
uspA
ABC-type sugar transport systems, permease components.
 
 
 0.874
ACPL_6840
ABC-type sugar transport systems, permease components.
 
 
 0.873
ACPL_1944
Putative ABC transporter permease protein yurN; ABC-type sugar transport systems, permease components.
 
 
 0.870
frlN
ABC-type sugar transport systems, permease components.
 
 
 0.868
ACPL_2153
ABC-type sugar transport systems, permease components.
 
 
 0.868
ACPL_2482
Putative ABC transporter permease protein yurN; ABC-type sugar transport systems, permease components.
 
 
 0.866
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.