Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACPL_3701HTH-type transcriptional activator rhaS; AraC-type DNA-binding domain-containing proteins. (251 aa)    
Predicted Functional Partners:
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.738
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.710
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.710
ACPL_6818
Fatty acid metabolism regulator protein; Transcriptional regulator.
 
  
 0.677
ACPL_5514
ydcN-like uncharacterized HTH-type transcriptional regulator; Predicted transcriptional regulators.
  
 
 0.671
ACPL_7632
Chromosome initiation inhibitor; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.638
nadR
Transcriptional regulator nadR; FAD synthase.
   
    0.637
ACPL_3700
Hypothetical protein.
       0.631
gltB
Glutamate synthase domain 2.
     
 0.613
ACPL_3702
Oxidoreductase; NADPH:quinone reductase and related Zn-dependent oxidoreductases.
  
  
 0.592
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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