STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3718Hypothetical protein. (132 aa)    
Predicted Functional Partners:
nuoE
NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 
 0.905
ctpD
Cation transporter P-type ATPase D; Cation transport ATPase.
 
     0.813
fdhF
Molybdopterin oxidoreductase; Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.736
ACPL_5754
Formate dehydrogenase, alpha subunit; Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.697
ACPL_5755
Formate dehydrogenase, alpha subunit; Uncharacterized anaerobic dehydrogenase.
  
 
 0.697
ACPL_457
NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
  
 0.652
ACPL_746
NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
  
 0.652
ACPL_3877
RNA polymerase, sigma-24 subunit, ECF subfamily.
  
     0.598
cadC-2
Cadmium efflux system accessory protein; Predicted transcriptional regulators.
 
     0.596
porA
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
  
  
 0.544
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.