STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbp3Retinol-binding protein 3; Periplasmic protease. (327 aa)    
Predicted Functional Partners:
ACPL_3721
Hypothetical protein.
       0.689
pheT
Phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
 
 0.581
g7c
Protein G7c.
  
     0.570
ACPL_3723
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
       0.551
ACPL_3724
Hypothetical protein.
       0.551
met-2
Hepatocyte growth factor receptor; FOG: Ankyrin repeat.
  
     0.509
met
Hepatocyte growth factor receptor; FOG: Ankyrin repeat.
  
     0.502
ACPL_3720
Hypothetical protein.
       0.480
nhoA
N-hydroxyarylamine O-acetyltransferase; Arylamine N-acetyltransferase; Belongs to the arylamine N-acetyltransferase family.
  
     0.455
moeB
Molybdopterin biosynthesis-like protein MoeZ; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
    0.400
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.