Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_3723Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components. (290 aa)    
Predicted Functional Partners:
ACPL_3724
Hypothetical protein.
       0.786
rbp3
Retinol-binding protein 3; Periplasmic protease.
       0.551
pdr1-3
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
  
 
 0.520
ramA
Lipid A export ATP-binding/permease protein msbA; ABC-type multidrug transport system, ATPase and permease components.
  
  0.515
pdr1-2
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
  
 
 0.502
ACPL_4557
ABC-type multidrug transport system, permease component.
  
 
 0.502
drrB
Daunorubicin resistance transmembrane protein; ABC-type multidrug transport system, permease component.
  
 
 0.502
ACPL_7407
Iron complex transport system ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
  
  
0.500
ACPL_3721
Hypothetical protein.
       0.496
rpsK
Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
     0.492
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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