STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_374Hypothetical protein. (500 aa)    
Predicted Functional Partners:
ACPL_376
Predicted transcriptional regulators.
 
     0.925
ACPL_375
Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components.
 
  
 0.876
ACPL_373
Hypothetical protein.
       0.773
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
  
     0.594
ACPL_6731
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.565
ACPL_6936
Putative ATP-dependent helicase; Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.564
ACPL_377
Hypothetical protein.
       0.545
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
  0.542
lolD
Spermidine/putrescine import ATP-binding protein potA; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  
 0.480
ACPL_3822
Predicted transcriptional regulators.
 
     0.476
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.