Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_3749Hypothetical protein. (203 aa)    
Predicted Functional Partners:
ACPL_819
Ycf40-like uncharacterized protein.
  
 0.856
thiG
Thiamine biosynthesis ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
  
 0.812
ACPL_3748
Uncharacterized protein.
     
 0.781
nadR
Transcriptional regulator nadR; FAD synthase.
  
 
  0.748
moaE
Molybdenum cofactor biosynthesis protein E; Molybdopterin converting factor, large subunit.
  
 0.724
ACPL_3750
Hypothetical protein; Nitroreductase.
       0.701
ACPL_1166
Uncharacterized protein; Molybdopterin converting factor, small subunit.
  
 0.690
ACPL_8322
Thiamine S protein.
  
 0.690
ACPL_3751
Hypothetical protein; Nitroreductase.
       0.640
ACPL_3752
Hypothetical protein.
     
 0.638
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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