STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_375Spermidine/putrescine import ATP-binding protein potA; ABC-type sugar transport systems, ATPase components. (228 aa)    
Predicted Functional Partners:
ACPL_374
Hypothetical protein.
 
  
 0.873
ACPL_376
Predicted transcriptional regulators.
 
     0.842
ACPL_2325
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.835
salY
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.834
ACPL_373
Hypothetical protein.
   
   0.784
ACPL_2928
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.760
ACPL_5171
Transitional endoplasmic reticulum ATPase; ATPases of the AAA+ class.
  
     0.663
ACPL_5143
Macrolide export ATP-binding/permease protein macB 1; ABC-type antimicrobial peptide transport system, permease component.
 
 
 0.653
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
   
 0.598
ACPL_4196
Macrolide export ATP-binding/permease protein macB; ABC-type antimicrobial peptide transport system, permease component.
 
 0.570
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.