STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3754Lantibiotic dehydratase domain protein. (889 aa)    
Predicted Functional Partners:
ACPL_3755
Hypothetical protein.
 
  
 0.969
ACPL_3753
ycaO-like uncharacterized protein.
 
  
 0.934
ACPL_3748
Uncharacterized protein.
 
  
 0.860
ACPL_3752
Hypothetical protein.
  
  
 0.799
ACPL_3751
Hypothetical protein; Nitroreductase.
       0.736
ACPL_3750
Hypothetical protein; Nitroreductase.
 
  
 0.723
ACPL_3749
Hypothetical protein.
       0.608
ACPL_3190
ycaO-like uncharacterized protein.
 
  
 0.547
ACPL_3756
Hypothetical protein.
       0.451
ACPL_3192
Nitroreductase.
 
  
 0.415
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.