Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3768Hypothetical protein. (155 aa)    
Predicted Functional Partners:
ACPL_3767
Signal transduction histidine kinase.
    
  0.613
ACPL_4099
Cellulase; Endoglucanase.
  
 
 0.578
celA
Endoglucanase.
  
 
 0.578
ACPL_3746
Strictosidine synthase; Gluconolactonase.
  
  
  0.520
ACPL_7818
Hypothetical protein.
  
     0.467
ACPL_5424
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
   
 0.462
bga
Beta-galactosidase.
   
 0.462
bga7
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
   
 0.462
bga-2
Beta-galactosidase.
   
 0.462
bga7-2
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
   
 0.462
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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