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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_3778Anaerobic nitric oxide reductase flavorubredoxin; Uncharacterized flavoproteins. (260 aa)    
Predicted Functional Partners:
ACPL_398
GAF sensor hybrid histidine kinase; FOG: HAMP domain.
 
  
 0.526
ACPL_3777
Hypothetical protein.
       0.484
fhbA-2
Flavohemoprotein; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases; Belongs to the globin family.
  
  
 0.460
ACPL_3779
Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.458
ACPL_3780
Magnesium or manganese-dependent protein phosphatase; FOG: PAS/PAC domain.
 
     0.442
bfd
BFD domain-containing protein (2Fe-2S)-binding domain-containing protein.
  
  
 0.434
nasD
Nitrite reductase (NAD(P)H) large subunit; NAD(P)H-nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.434
fprC
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
  
 0.434
niiA
Nitrite reductase; NAD(P)H.
  
  
 0.434
ACPL_7964
Uncharacterized protein; Phosphate transport regulator (distant homolog of PhoU).
   
    0.426
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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